This is an archive. See for current LaMaStEx activities.

CodemlZ -- Modified Codeml Package for Detecting Physicochemical Selection

Source Code

  • Download Source code for codemlZ,
  • Extract (tar zxvf paml3.14.Z.tgz) in Gnu/Linux,*Linux,Unix,Solaris or Mac OS X,
  • Read README.PhysChem.txt in paml3.14.Z
  • Using Cygwin in Windows David Yu has successfully compiled and tested codemlZ (Communication Details and for Windows XP SP2 machine).

Appropriate Citation

"Detecting site-specific physicochemical selective pressures: applications to the class-I HLA of the human major histocompatibility complex and the SRK of the plant sporophytic self-incompatibility system," Raazesh Sainudiin, Wendy Shuk Wan Wong, Krithika Yogeeswaran, June Nasrallah, Ziheng Yang and Rasmus Nielsen, Journal of Molecular Evolution 2005 60: 315-326 (Preprint)

Last modified on Thursday, 01-Sep-2016 18:11:28 MST and served on Tuesday, 21-May-2024 02:51:54 MST.

  • Laboratory for Mathematical Statistical Experiments
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    Uppsala Centre
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